Showing 1 - 10 of 10 Items
Determining the influence of proximal Zeste binding sites and promoters on rates of transvection This record is embargoed.
- Embargo End Date: 2026-05-17
Date: 2023-01-01
Creator: Molly Henderson
Access: Embargoed
Hybridization dynamics of a newly discovered parrotfish swarm in the Tropical Eastern Pacific
Date: 2017-05-01
Creator: Robert Barron
Access: Open access
- Hybrid zones and their dynamics are important in the understanding of the genetic basis of reproductive isolation and speciation. This study seeks to investigate the hybridization dynamics of a Scarus hybrid swarm within the Tropical Eastern Pacific (TEP) that includes four phenotypically distinct species: S. perrico, S. ghobban, S. rubroviolaceus, and S. compressus. Genetic and population structure analyses of four nuclear loci and a mitochondrial locus revealed that one of the four species, S. compressus, was the result of two different hybrid crosses: S. perrico ✕ S. rubroviolaceus and S. perrico ✕ S. ghobban. A NewHybrids model indicated that most of the S. compressus samples were F1 hybrids, but 21% of the S. compressus sample was classified as “parentals” which could also be explained by the presence of either F2 hybrids or backcrosses with S. compressus phenotypes, given the relatively low power of the nuclear data set (4 loci) to resolve complex hybrid genotypes. Significant mito-nuclear discordance in all three non-hybrid species is consistent with an evolutionary effect of backcrossing between F1 hybrids and “pure” species. This study reveals a relative ease of hybridization between parrotfish taxa separated by an estimated 4.5 million years of isolation and opens the door to further studies on the potential effects of gene flow across old species boundaries and perhaps the formation of new species by hybrid speciation in a diverse clade of tropical reef fish. Elucidating the nature of potentially “deep” F2 crosses and backcrosses within the TEP Scarus hybrid system will allow us to better understand the effects of hybridization on evolution and speciation on both a micro- and macro-ecological scale.
Investigating the Role of Heterochromatin Protein 1 (HP1) in the Formation of Chromosome Compartments Access to this record is restricted to members of the Bowdoin community. Log in here to view.
- Restriction End Date: 2025-06-01
Date: 2020-01-01
Creator: Diego Andres Villamarin
Access: Access restricted to the Bowdoin Community
Cell Adhesion in Arabidopsis thaliana Access to this record is restricted to members of the Bowdoin community. Log in here to view.
Date: 2019-05-01
Creator: Natasha Ann Belsky
Access: Access restricted to the Bowdoin Community
Role of Polycomb group proteins in regulation of eyes absent gene expression in Drosophila melanogaster This record is embargoed.
- Embargo End Date: 2027-05-16
Date: 2024-01-01
Creator: Joanne Du
Access: Embargoed
Examining the role of GRP and LIK1 in Wall Associated Kinase (WAK) perception of pectin in the plant cell wall
Date: 2017-01-01
Creator: Jack Ryan Mitchell
Access: Open access
- Wall associated kinases (WAKs) are cell membrane bound receptor kinases that bind pectin and pectin fragments (OGs).The binding of WAKs to pectin sends a growth signal required for cell elongation and plant development. WAKs bind OGs with higher affinity than native pectin and instead activate a stress response. Glycine rich proteins (GRPs) are secreted cell wall proteins of unknown function. Seven GRPs with 65% sequence similarity are coded on a 90kb locus of Arabidopsis chromosome 2. GRP3 and WAK1 have been shown to bind in vitro, but single null mutations have no discernible phenotype, suggesting that the GRPs are redundant. Low recombination frequency has made multiple mutations difficult to achieve, but in this thesis, CRISPR/Cas9 technology was used to induce deletions of the GRP locus. The promoters pYAO and pICU2 drove Cas9 expression in transformed Arabidopsis plants. The presence of a deletion and Cas9 were detected by PCR. While somatic mutations were induced, there was no inheritance of the GRP deletion, indicating that pYAO and pICU2 do not drive Cas9 to induce deletions in progenitor cells. LIK1 is a CERK1 interacting kinase implicated in mediating response to various microbe associated molecular patterns (MAMP) such as chitin, flagellin, and peptidoglycans. LIK1 exhibits a drastic increase in phosphorylation in response to OG treatment, making it a candidate for a co-receptor to WAK. T-DNA insertions to the 5’UTR of LIK1 were used to examine the effect of a lik1 mutation on the OG induced stress response. lik1/lik1 mutant seedlings were grown in the presence and absence of OGs, and RNA was isolated. qPCR was used on cDNA to examine FADLOX expression, a reporter for the transcriptional response to OGs. The lik1/lik1 mutant caused a reduction in the OG induced transcriptional response. However, increased LIK1 expression was associated with the T-DNA insertion indicating that LIK1 inhibits the WAK stress response pathway. Understanding the roles of GRP and LIK1 in moderating WAK mediated pathogenic response in Arabidopsis will enable a better understanding of plant resistance to pathogen invasion in the greater plant kingdom.
Characterization and distribution of allatostatin type-C (AST-C) neuropeptides and receptors in crustaceans Access to this record is restricted to members of the Bowdoin community. Log in here to view.
Date: 2016-05-01
Creator: Tess Lameyer
Access: Access restricted to the Bowdoin Community
Regulation of eyes absent gene expression in Drosophila melanogaster by Polycomb Group Response Elements Access to this record is restricted to members of the Bowdoin community. Log in here to view.
- Restriction End Date: 2025-06-01
Date: 2020-01-01
Creator: Boris S. Dimitrov
Access: Access restricted to the Bowdoin Community
Comparing natural variation in enhancer usage within and among Drosophila species This record is embargoed.
- Embargo End Date: 2027-05-19
Date: 2022-01-01
Creator: Justin K. Yang
Access: Embargoed
The identification and visualization of candidate early embryonic patterning genes in Bradysia coprophila This record is embargoed.
- Embargo End Date: 2027-05-16
Date: 2024-01-01
Creator: Sarah Conant
Access: Embargoed